BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032F05LP1|AL429599
(912 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig510 1166 0.0
>3x_Contig510
Length = 2210
Score = 1166 bits (588), Expect = 0.0
Identities = 637/644 (98%), Gaps = 7/644 (1%)
Strand = Plus / Minus
Query: 1 taaaatccttttaattgatcttacgcaaaacaatctttcaaatagttttaagttgtgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 taaaatccttttaattgatcttacgcaaaacaatctttcaaatagttttaagttgtgaga 582
Query: 61 aaaacctgtactaaaaaataaaaaactgatgaaaaacttcaagttcatgattatacgtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 aaaacctgtactaaaaaataaaaaactgatgaaaaacttcaagttcatgattatacgtac 522
Query: 121 ctcgatggaaagaaaaaaataacatactagattaccctgtctttggtgaggtgcgcccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ctcgatggaaagaaaaaaataacatactagattaccctgtctttggtgaggtgcgcccaa 462
Query: 181 aattcatctttcaggggccagaaaggtcccattagccttattttcggggtgaagaccggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 aattcatctttcaggggccagaaaggtcccattagccttattttcggggtgaagaccggt 402
Query: 241 cgatgccattcagcatcgctatttacgatcggcgttgaagatgtataaaatatcaccttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 cgatgccattcagcatcgctatttacgatcggcgttgaagatgtataaaatatcaccttg 342
Query: 301 gacggcttgaaaaaaattgacagcttcatctttgtcaacagtaggaagttctacagatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gacggcttgaaaaaaattgacagcttcatctttgtcaacagtaggaagttctacagatat 282
Query: 361 tcacaatctcatcgcttaggattaatgatattagagtttcattatagtttggttacagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tcacaatctcatcgcttaggattaatgatattagagtttcattatagtttggttacagag 222
Query: 421 gccaaaatcagttaaacggttggaatcgataggtatcagtcagtattccactgaggttgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 gccaaaatcagttaaacggttggaatcgataggtatcagtcagtattccactgaggttgg 162
Query: 481 catcaaattataaaaaaaggatttattttgaagaatttcctgatcaatatctgaattgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 catcaaattataaaaaaaggatttattttgaagaatttcctgatcaatatctgaattgaa 102
Query: 541 ataaaagcatgtctacgacagtagagaagattaaggccatcgaagatgagatggcccgta 600
||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 101 ataaaag-atgtctacgacagtagagaagattaagg-catcgaaga-gagatggcccgta 45
Query: 601 cccaaaagaataaggccacttcttttcatttgggtcagttgaaa 644
|||||||||||||| |||||| |||||||||||| ||||||||
Sbjct: 44 -ccaaaagaataagg-cacttc-tttcatttgggt-agttgaaa 5
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8464
Number of Sequences: 1807
Number of extensions: 8464
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 912
length of database: 10,358,551
effective HSP length: 16
effective length of query: 896
effective length of database: 10,329,639
effective search space: 9255356544
effective search space used: 9255356544
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)